Single particle hit. More...

#include <hitrate.h>

Inheritance diagram for cass::pp300:

Collaboration diagram for cass::pp300:

Public Member Functions
	pp300 (const name_t &)
	constructor More...

virtual	~pp300 ()
	virtual destructor More...

virtual void	process (const CASSEvent &, result_t &)
	check if image specified in settings contains a single particle hit More...

virtual void	loadSettings (size_t)
	load the settings for this pp More...

Public Member Functions inherited from cass::Processor
	Processor (const name_t &name)
	constructor More...

virtual	~Processor ()
	virtual destructor More...

virtual void	processEvent (const CASSEvent &event)
	process the event More...

virtual const result_t &	result (const CASSEvent::id_t eventid=0)
	retrieve a result for a given id. More...

virtual void	releaseEvent (const CASSEvent &event)
	tell the list that the result for event can be overwritten More...

result_t::shared_pointer	resultCopy (const uint64_t eventid)
	retrieve histogram for id More...

virtual void	load ()
	load the general settings More...

virtual void	aboutToQuit ()
	function that will be called when the processor is about to be deleted More...

const names_t &	dependencies ()
	Define all processors keys a processor depends on. More...

void	clearDependencies ()
	clear the dependenies More...

void	clearHistograms ()
	clear the histograms More...

const name_t	name () const
	retrieve the name of this processor More...

bool	hide () const
	retrieve the hide flag of this processor More...

const std::string &	comment () const
	retrieve the comment of this processor More...

Protected Types
typedef vigra::Matrix< double >	matrixType

Protected Member Functions
void	trainingFinished ()

void	startNewTraining ()

void	readTrainingMatrices ()

void	saveTrainingMatrices ()

void	printTrainingMatrices ()

virtual void	clearHistogramEvent ()

virtual void	processCommand (std::string command)
	process command in pp More...

Protected Member Functions inherited from cass::Processor
virtual void	createHistList (result_t::shared_pointer result)
	create result list. More...

void	setupGeneral ()
	general setup of the processor More...

bool	setupCondition (bool defaultConditionType=true)
	setup the condition. More...

shared_pointer	setupDependency (const std::string &depVarName, const name_t &name="")
	setup the dependecy. More...

Protected Attributes
int	_xstart
	xstart - ROI for calculations More...

int	_ystart
	ystart - ROI for calculations More...

int	_xend
	xend - ROI for calculations More...

int	_yend
	yend - ROI for calculations More...

shared_pointer	_pHist
	the histogram to work on More...

int	_nTrainingSetSize

int	_nFeatures

int	_saveTraining
	user setting: do (default) or don't save training matrices to file More...

int	_readTraining
	if filename is given in settings, load instead of calculate More...

std::string	_trainingFile
	optional user-setting: filename to read training from More...

matrixType	_variationFeatures

matrixType	_mean

matrixType	_cov

matrixType	_covI

int	_trainingSetsInserted

int	_reTrain

QMutex	_mutex
	mutex to lock the processing part since only one can be processed at a time More...

Protected Attributes inherited from cass::Processor
const name_t	_name
	the processors name More...

bool	_hide
	flag to tell whether this pp should be hidden in the dropdown list More...

std::string	_comment
	optional comment that one can add to a processor. More...

CachedList	_resultList
	the list of results More...

names_t	_dependencies
	the list of dependencies More...

shared_pointer	_condition
	pointer to the processor that will contain the condition More...

Additional Inherited Members
Public Types inherited from cass::Processor
typedef std::tr1::shared_ptr< Processor >	shared_pointer
	a shared pointer of this More...

typedef std::string	name_t
	define the name type More...

typedef std::list< name_t >	names_t
	define the list of names More...

typedef CachedList::item_type	result_t
	define the results More...

typedef CachedList::item_sp	resultsp_t
	define the shared pointer to the result More...

Detailed Description

Single particle hit.

Available PostProcessors:: "300": detect Single Particle hits.

See also: Processor for a list of all commonly available cass.ini settings.

User definable Parameters:

Processor/%name%/{ImageName}
processor name containing the histogram in which hits should be detected.

Processor/%name%/{xstart}
ROI for calculations. First pixel = 0 (default).

Processor/%name%/{ystart}
ROI for calculations. First pixel = 0 (default).

Processor/%name%/{xend}
ROI for calculations. Last pixel = -1 (default).

Processor/%name%/{yend}
ROI for calculations. Last pixel = -1 (default).

Processor/%name%/{TrainingSetSize}
How many images should be included in training phase. default = 200.

Processor/%name%/{saveTraining}
optional. If true (default), save Training matrices to files with automaic names in currend directory.

Processor/%name%/{readTrainingFile}
optional filename to read training matrices from. If setting doesn't exist, training is not read but calculated on "loadSettings".

(good ROI for single particle in pnCCD images: xstart=402;xend=485; ystart=402;yend=485;