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CASS
Public Member Functions | Protected Attributes | List of all members
cass::pp205 Class Reference

visualize the peaks that were found in the image itself More...

#include <hitfinder.h>

+ Inheritance diagram for cass::pp205:
+ Collaboration diagram for cass::pp205:

Public Member Functions

 pp205 (const name_t &name)
 constructor More...
 
virtual void process (const CASSEvent &, result_t &)
 process event More...
 
virtual void loadSettings (size_t)
 load the settings of this pp More...
 
- Public Member Functions inherited from cass::Processor
 Processor (const name_t &name)
 constructor More...
 
virtual ~Processor ()
 virtual destructor More...
 
virtual void processEvent (const CASSEvent &event)
 process the event More...
 
virtual const result_tresult (const CASSEvent::id_t eventid=0)
 retrieve a result for a given id. More...
 
virtual void releaseEvent (const CASSEvent &event)
 tell the list that the result for event can be overwritten More...
 
result_t::shared_pointer resultCopy (const uint64_t eventid)
 retrieve histogram for id More...
 
virtual void load ()
 load the general settings More...
 
virtual void aboutToQuit ()
 function that will be called when the processor is about to be deleted More...
 
const names_tdependencies ()
 Define all processors keys a processor depends on. More...
 
void clearDependencies ()
 clear the dependenies More...
 
void clearHistograms ()
 clear the histograms More...
 
virtual void processCommand (std::string command)
 process command in pp More...
 
const name_t name () const
 retrieve the name of this processor More...
 
bool hide () const
 retrieve the hide flag of this processor More...
 
const std::string & comment () const
 retrieve the comment of this processor More...
 

Protected Attributes

shared_pointer _hist
 pp containing 2d histogram More...
 
shared_pointer _table
 pp containing the results More...
 
result_t::value_t _drawVal
 draw flags as bitmask More...
 
result_t::value_t _drawInnerValue
 
float _radius
 
std::pair< int, int > _boxsize
 
bool _drawCircle
 
bool _drawBox
 
bool _drawInner
 
size_t _idxCol
 the number of the column where the global index of the pixel is More...
 
- Protected Attributes inherited from cass::Processor
const name_t _name
 the processors name More...
 
bool _hide
 flag to tell whether this pp should be hidden in the dropdown list More...
 
std::string _comment
 optional comment that one can add to a processor. More...
 
CachedList _resultList
 the list of results More...
 
names_t _dependencies
 the list of dependencies More...
 
shared_pointer _condition
 pointer to the processor that will contain the condition More...
 

Additional Inherited Members

- Public Types inherited from cass::Processor
typedef std::tr1::shared_ptr< Processorshared_pointer
 a shared pointer of this More...
 
typedef std::string name_t
 define the name type More...
 
typedef std::list< name_tnames_t
 define the list of names More...
 
typedef CachedList::item_type result_t
 define the results More...
 
typedef CachedList::item_sp resultsp_t
 define the shared pointer to the result More...
 
- Protected Member Functions inherited from cass::Processor
virtual void createHistList (result_t::shared_pointer result)
 create result list. More...
 
void setupGeneral ()
 general setup of the processor More...
 
bool setupCondition (bool defaultConditionType=true)
 setup the condition. More...
 
shared_pointer setupDependency (const std::string &depVarName, const name_t &name="")
 setup the dependecy. More...
 

Detailed Description

visualize the peaks that were found in the image itself

Available PostProcessors:
"205": visualize the peaks that were found in the image itself
See also
Processor for a list of all commonly available cass.ini settings.
User definable Parameters:

Processor/%name%/{ImageName}
the processor name that contain the 2d histogram. Default is "blubb".

Processor/%name%/{TableName}
name of processor that contains the table like histogram that the pixels of interest are taken from

Processor/%name%/{BoxSizeX|BoxSizeY}
size in x and y of the box that should be drawn around the found peak

Processor/%name%/{DrawPixelValue}
The value of the border pixels

Processor/%name%/{DrawInnerPixel}
flag to tell whether the inner pixel values should be overwritten

Processor/%name%/{InnerPixelValue}
The value of the inner pixels.

Processor/%name%/{Radius}

Processor/%name%/{IndexColumn}

Processor/%name%/{DrawCircle}

Processor/%name%/{DrawBox}

Author
Lutz Foucar
Wolfgang Kabsch

Definition at line 224 of file hitfinder.h.

Constructor & Destructor Documentation

pp205::pp205 ( const name_t name)

constructor

Definition at line 401 of file hitfinder.cpp.

References loadSettings().

Member Function Documentation

void pp205::loadSettings ( size_t  )
virtual
void pp205::process ( const CASSEvent evt,
result_t result 
)
virtual

process event

copy the input image to the resulting image

extract the nbr of rows and columns of this table and the image

go through all rows in table

extract the column with the global index of the peak center

draw user requested info (extract other stuff from table)

Reimplemented from cass::Processor.

Definition at line 448 of file hitfinder.cpp.

References _boxsize, _drawBox, _drawCircle, _drawInner, _drawInnerValue, _drawVal, _hist, _idxCol, _radius, _table, cass::Result< T >::begin(), cass::Result< T >::end(), cass::CASSEvent::id(), cass::Result< T >::lock, cass::Processor::name(), cass::Result< T >::shape(), cass::Result< T >::size(), and cass::toString().

Member Data Documentation

std::pair<int,int> cass::pp205::_boxsize
protected

Definition at line 246 of file hitfinder.h.

Referenced by loadSettings(), and process().

bool cass::pp205::_drawBox
protected

Definition at line 247 of file hitfinder.h.

Referenced by loadSettings(), and process().

bool cass::pp205::_drawCircle
protected

Definition at line 247 of file hitfinder.h.

Referenced by loadSettings(), and process().

bool cass::pp205::_drawInner
protected

Definition at line 247 of file hitfinder.h.

Referenced by loadSettings(), and process().

result_t::value_t cass::pp205::_drawInnerValue
protected

Definition at line 244 of file hitfinder.h.

Referenced by loadSettings(), and process().

result_t::value_t cass::pp205::_drawVal
protected

draw flags as bitmask

Definition at line 244 of file hitfinder.h.

Referenced by loadSettings(), and process().

shared_pointer cass::pp205::_hist
protected

pp containing 2d histogram

Definition at line 238 of file hitfinder.h.

Referenced by loadSettings(), and process().

size_t cass::pp205::_idxCol
protected

the number of the column where the global index of the pixel is

Definition at line 250 of file hitfinder.h.

Referenced by loadSettings(), and process().

float cass::pp205::_radius
protected

Definition at line 245 of file hitfinder.h.

Referenced by loadSettings(), and process().

shared_pointer cass::pp205::_table
protected

pp containing the results

Definition at line 241 of file hitfinder.h.

Referenced by loadSettings(), and process().


The documentation for this class was generated from the following files: